Publication: Testing for pathway (in)activation using Gaussian graphical models
Two articles accepted
Co-data Random Forest Paper published
Publication: Ridge precision estimation for networks 2
Publication: Ridge estimation of the mixtures multivariate Gaussians.
In the newspaper: Personalized Medicine
Publication: A test for indirect trans effects
Our paper on a test for detecting differential effects between two networks involving two types of measurements each is now available online:
Chaturvedi N, Menezes RX, Goeman JJ and van Wieringen WN (2018). A test for detecting differential indirect trans effects between two groups of samples. Statistical Applications in Genetics and Molecular Biology (in press). DOI: 10.1515/sagmb-2017-0058.
It can for example be used to compare gene expression networks built for two subsets of samples, conditional on underlying copy number changes.